2010-12-23

AtGRP7 qPCR #2

Setup the plate for qPCR of the previous samples, AtGRP7 stuff only.

Mastermix, one for each of 9 samples:
105 2x Bio-rad Sybr
18 water
3 cDNA

Primer mastermix:
66 primer (At3g25470, AtGRP7_spliced, AtGRP7_mature)
198 water

*** Just realized I didn’t add the mature splice primers for the 12hpi hrcC sample. Damn it! ***

.pcrd                PDF

All:
all-2010-12-23-14-41.png

5hpi, 7hpi, 12hpi:
5hpi-2010-12-23-14-41.png7hpi-2010-12-23-14-41.png12hpi-2010-12-23-14-41.png

5hpi, 7hpi, 12hpi using the mock as a control:
5hpi_mock_reference-2010-12-23-14-41.png7hpi_mock_reference-2010-12-23-14-41.png12hpi_mock_reference-2010-12-23-14-41.png

5hpi and 7hpi using mock as control and Mature as reference (instead of At3g25470)
5hpi_mature_mock_reference-2010-12-23-14-41.png7hpi_mature_mock_reference-2010-12-23-14-41.png

At first glance, everything is the same as last time we used mature as the reference, except for the 7hpi hrcC. This time shows a drop in the spliced versus the mature at 7hpi, but before it didn’t drop at all, and stayed about a 1:1 ratio the entire time. Last time’s 5hpi and 7hpi (mock isn’t shown, but is set to 1):
PastedGraphic14-2010-12-23-14-41.jpgPastedGraphic15-2010-12-23-14-41.jpg

Have to re-do the 12hpi stuff... found here

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